Type: Package Package: bamm Title: Species Distribution Models as a Function of Biotic, Abiotic and Movement Factors (BAM) Version: 0.7.1 Authors@R: c( person("Luis", "Osorio-Olvera", email = "luismurao@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-0701-5398")), person("Jorge", "Soberón", email = "soberon@ku.edu", role = "aut", comment = c(ORCID = "0000-0003-2160-4148")), person("Rusby G.", "Contreras-Díaz", email = "rusby.contreras.diaz@gmail.com", role = "ctb", comment = c(ORCID = "0000-0002-0569-8984")) ) Maintainer: Luis Osorio-Olvera Description: Species Distribution Modeling (SDM) is a practical methodology that aims to estimate the area of distribution of a species. However, most of the work has focused on estimating static expressions of the correlation between environmental variables. The outputs of correlative species distribution models can be interpreted as maps of the suitable environment for a species but not generally as maps of its actual distribution. Soberón and Peterson (2005) presented the BAM scheme, a heuristic framework that states that the occupied area of a species occurs on sites that have been accessible through dispersal (M) and have both favorable biotic (B) and abiotic conditions (A). The 'bamm' package implements classes and functions to operate on each element of the BAM and by using a cellular automata model where the occupied area of a species at time t is estimated by the multiplication of three binary matrices: one matrix represents movements (M), another abiotic -niche- tolerances (A), and a third, biotic interactions (B). The theoretical background of the package can be found in Soberón and Osorio-Olvera (2023) . License: GPL (>= 3) URL: https://luismurao.github.io/bamm/ BugReports: https://github.com/luismurao/bamm/issues Depends: R (>= 4.1.0) Imports: animation (>= 2.3), dplyr (>= 0.8.0), furrr (>= 0.1.0), future (>= 1.18.0), graphics, grDevices, igraph (>= 1.2), leaflet (>= 2.0), magrittr (>= 1.2), Matrix (>= 1.2.14), methods (>= 3.3), purrr (>= 0.2), raster (>= 3.4-13), Rcpp (>= 0.12.18), Rdpack (>= 0.11.0), RSpectra (>= 0.13.1), sp (>= 1.3.0), exactextractr, stats, utils Suggests: knitr, rmarkdown, testthat (>= 3.0.0), crosstalk, plotly, spelling LinkingTo: Rcpp, RcppArmadillo VignetteBuilder: knitr RdMacros: Rdpack Config/testthat/edition: 3 Encoding: UTF-8 NeedsCompilation: yes RoxygenNote: 7.3.2 SystemRequirements: GDAL (>= 2.2.3): gdal-bin (deb), libgdal-dev (deb) or gdal-devel (rmp), GEOS (>= 3.4.0), PROJ (>= 4.9.3): libproj-dev (deb), sqlite3, ImageMagick++: imagemagick (deb), libmagic-dev (deb), libmagick++-dev (deb) or ImageMagick-c++-devel (rpm) ImageMagick (http://imagemagick.org) or GraphicsMagick (http://www.graphicsmagick.org) or LyX (http://www.lyx.org) for saveGIF(); (PDF)LaTeX for saveLatex(); SWF Tools (http://swftools.org) for saveSWF(); FFmpeg (http://ffmpeg.org) or avconv (https://libav.org/avconv.html) for saveVideo() Packaged: 2026-10-13 10:38:18 UTC; root Author: Luis Osorio-Olvera [aut, cre] (), Jorge Soberón [aut] (), Rusby G. Contreras-Díaz [ctb] () Language: en-US Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev libglpk-dev make libmagick++-dev gsfonts texlive libmagic-dev libpng-dev libuv1-dev libxml2-dev libssl-dev libproj-dev libsqlite3-dev libudunits2-dev Repository: https://luismurao.r-universe.dev Date/Publication: 2026-04-14 19:15:05 UTC RemoteUrl: https://github.com/luismurao/bamm RemoteRef: HEAD RemoteSha: 35a95bb3c25fb661c683e6d8d2e6c775012b706c